Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs76871350 chr21:44230041 C/T 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs76876269 chr17:80795682 C/T 7.49E-9 285 26.28 25.55 16.4 KM Plot
KIRP rs76888103 chr22:21102637 G/A 7.92E-7 283 24.48 36.43 17.48 KM Plot
KIRP rs76895394 chr10:43528204 C/T 5.86E-5 289 25.62 26.52 11.43 KM Plot
KIRP rs76914616 chr10:43393272 C/G 5.62E-6 287 25.7 24.57 16.12 KM Plot
KIRP rs76922158 chr17:80839410 C/T 2.99E-6 285 26.28 22.8 16.77 KM Plot
KIRP rs76936474 chr2:47139184 C/A 2.19E-7 289 25.37 34.43 10.97 KM Plot
KIRP rs76940666 chr3:5464310 A/G 2.02E-5 276 25.37 30.9 11.37 KM Plot
KIRP rs76962916 chr10:43158518 T/C 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs77017987 chr17:80756658 C/A 6.46E-9 283 25.78 28.35 16.4 KM Plot
KIRP rs77020305 chr10:124809718 A/C 0.000119 287 25.57 27.37 18.33 KM Plot
KIRP rs77039435 chr12:49904595 T/G 5.89E-6 282 25.82 34.97 10.97 KM Plot
KIRP rs7706978 chr5:156432566 T/C 6.04E-6 288 12.1 26.4 26.1 KM Plot
KIRP rs77072593 chr7:20680130 G/A 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs77095994 chr21:44270931 G/A 0.000143 287 25.58 40.7 13.07 KM Plot